7XPU
crystal structure of MtdL-S228A-His soaked GDP-Fucp and Mn
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-12 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 98.189, 162.548, 115.662 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.120 - 2.200 |
R-factor | 0.2397 |
Rwork | 0.238 |
R-free | 0.27980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7xpr |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | PHENIX (1.11) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.640 | 47.640 | 2.270 |
High resolution limit [Å] | 2.200 | 9.070 | 2.200 |
Rmerge | 0.158 | 0.035 | 0.990 |
Rmeas | 0.167 | 0.037 | 1.049 |
Rpim | 0.054 | 0.013 | 0.340 |
Total number of observations | 435511 | 5654 | 37223 |
Number of reflections | 46848 | 732 | 4034 |
<I/σ(I)> | 9.9 | 29.1 | 2.3 |
Completeness [%] | 99.3 | 96.8 | 99.2 |
Redundancy | 9.3 | 7.7 | 9.2 |
CC(1/2) | 0.998 | 0.999 | 0.916 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 283 | 0.2 M ammonium sulfate, 0.1 M Tris, pH 7.5, 20% (w/v) PEG 5000 MME |