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7XMK

Crystal structure of human RIPK1 kinase domain in complex with compound SKLB923

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNFPSS BEAMLINE BL18U
Synchrotron siteNFPSS
BeamlineBL18U
Temperature [K]100
Detector technologyPIXEL
Collection date2021-02-05
DetectorDECTRIS PILATUS3 X CdTe 1M
Wavelength(s)0.97915
Spacegroup nameP 21 21 21
Unit cell lengths48.885, 100.904, 127.594
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.415 - 2.376
R-factor0.226
Rwork0.224
R-free0.25850
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4itj
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.410
High resolution limit [Å]2.3702.370
Rmerge0.100
Number of reflections261401259
<I/σ(I)>25.727
Completeness [%]100.0
Redundancy10
CC(1/2)0.699
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2770.25M ammonium iodide, 0.03M glycyl-glycyl-glycine, 23% polyethylene glycol (PEG) 3350

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PDB entries from 2024-07-10

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