7XIU
Crystal structure of engineered HIV-1 Reverse Transcriptase RNase H domain complexed with nitrofuran methoxy(methoxycarbonyl)phenyl ester
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-16 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 62.061, 62.061, 83.001 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.880 - 2.090 |
R-factor | 0.2229 |
Rwork | 0.221 |
R-free | 0.26670 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3qin |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.27) |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.880 | 43.880 | 2.140 |
High resolution limit [Å] | 2.090 | 9.100 | 2.090 |
Rmerge | 0.177 | 0.076 | 1.342 |
Rmeas | 0.185 | 0.082 | 1.398 |
Rpim | 0.051 | 0.028 | 0.386 |
Total number of observations | 131700 | 1609 | 9077 |
Number of reflections | 10151 | 167 | 733 |
<I/σ(I)> | 8.3 | 22.1 | 1.8 |
Completeness [%] | 99.6 | 99.4 | 94.6 |
Redundancy | 13 | 9.6 | 12.4 |
CC(1/2) | 0.997 | 0.998 | 0.603 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.6 | 291 | 0.1M MES, 26% (v/v) PEG 6000, 0.01M Zinc Sulfate, 0.001M MANGANESE CHLORIDE |