7XBJ
Txp40, an insecticidal toxin protein from Xenorhabdus nematophila
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
Synchrotron site | RRCAT INDUS-2 |
Beamline | PX-BL21 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-11-04 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.9789 |
Spacegroup name | I 21 21 21 |
Unit cell lengths | 94.576, 97.029, 147.953 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.860 - 2.080 |
R-factor | 0.2191 |
Rwork | 0.218 |
R-free | 0.24760 |
Structure solution method | SAD |
RMSD bond length | 0.004 |
RMSD bond angle | 0.797 |
Data reduction software | autoPROC (1.0.5) |
Data scaling software | Aimless (0.7.4) |
Phasing software | CRANK2 (2.0.281) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 81.137 | 2.247 |
High resolution limit [Å] | 2.080 | 2.080 |
Rmerge | 0.065 | 2.014 |
Rmeas | 0.068 | 2.115 |
Rpim | 0.018 | 0.543 |
Number of reflections | 30251 | 1514 |
<I/σ(I)> | 24.8 | 1.5 |
Completeness [%] | 85.9 | 60.1 |
Redundancy | 14.6 | 14.6 |
CC(1/2) | 1.000 | 0.673 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6 | 294 | 2.5M Ammonium Sulphate, 0.1M Bis-Tris, pH 6.0 |