7XAZ
Crystal structure of Omicron BA.1.1 RBD complexed with hACE2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-07 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.979 |
Spacegroup name | P 41 |
Unit cell lengths | 129.520, 129.520, 189.199 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.590 - 3.000 |
R-factor | 0.1993 |
Rwork | 0.198 |
R-free | 0.23020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6lzg |
RMSD bond length | 0.003 |
RMSD bond angle | 0.584 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.110 |
High resolution limit [Å] | 3.000 | 3.000 |
Number of reflections | 62359 | 6181 |
<I/σ(I)> | 11.3 | |
Completeness [%] | 99.9 | |
Redundancy | 6.2 | |
CC(1/2) | 0.995 | 0.639 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 0.2 M Potassium thiocyanate 20 % w/v PEG 3350 |