Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7X4V

Crystal structure of Rhodostomin ARGDDP mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL12B2
Synchrotron siteSPring-8
BeamlineBL12B2
Temperature [K]100
Detector technologyCCD
Collection date2013-06-05
DetectorADSC QUANTUM 210
Wavelength(s)1.00000
Spacegroup nameC 1 2 1
Unit cell lengths78.293, 62.092, 34.756
Unit cell angles90.00, 105.61, 90.00
Refinement procedure
Resolution18.090 - 1.380
R-factor0.18469
Rwork0.183
R-free0.21689
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4rqg
RMSD bond length0.009
RMSD bond angle1.444
Data reduction softwareHKL-2000 (2.3.10)
Data scaling softwareHKL-2000 (2.3.10)
Phasing softwareHKL-3000 (2.3.10)
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.430
High resolution limit [Å]1.3801.380
Rmerge0.1170.550
Number of reflections320383211
<I/σ(I)>13.4
Completeness [%]97.1
Redundancy4.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2 M NH4OAc, 0.05 M Sodium cacodylate pH 6.5, 30% PEG 8,000

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon