7X1B
Crystal structure of peptide KAGQVVTI in complex with HLA-B5801
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSRRC BEAMLINE TPS 05A |
| Synchrotron site | NSRRC |
| Beamline | TPS 05A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2018-11-21 |
| Detector | RAYONIX MX300-HS |
| Wavelength(s) | 1 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 50.442, 81.715, 109.234 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 38.268 - 1.399 |
| R-factor | 0.1548 |
| Rwork | 0.154 |
| R-free | 0.17870 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7wzz |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.084 |
| Data reduction software | HKL-2000 |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 38.268 | 1.449 |
| High resolution limit [Å] | 1.399 | 1.399 |
| Number of reflections | 87950 | 8489 |
| <I/σ(I)> | 19.42 | |
| Completeness [%] | 98.0 | |
| Redundancy | 7.3 | |
| CC(1/2) | 1.000 | 0.648 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.9 | 293 | 0.2 M Sodium thiocyanate, 20% w/v Polyethylene glycol 3350 |






