Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7WZG

Cypemycin N-terminal methyltransferase CypM

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL18U1
Synchrotron siteSSRF
BeamlineBL18U1
Temperature [K]100
Detector technologyCCD
Collection date2021-06-28
DetectorADSC QUANTUM 315r
Wavelength(s)0.9792
Spacegroup nameH 3
Unit cell lengths245.111, 245.111, 81.653
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution30.090 - 2.000
R-factor0.1967
Rwork0.195
R-free0.23780
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Alphafold2
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareBALBES
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.030
High resolution limit [Å]2.0002.000
Rmerge0.161
Number of reflections1217207270
<I/σ(I)>14.2
Completeness [%]90.4
Redundancy1.6
CC(1/2)0.9880.780
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP291Final optimized conditions for YunM with SAM contained 1800 mM Ammonium sulfate, 100 mM CAPS/ Sodium hydroxide pH 10.4, 100 mM Lithium sulfate, and yielded square crystals.

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon