7WYS
Crystal structures of Na+,K+-ATPase in complex with istaroxime
Replaces: 7EVXReplaces: 6KPYReplaces: 7DDGExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-12-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 115.109, 117.470, 491.339 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 15.980 - 3.710 |
R-factor | 0.1947 |
Rwork | 0.193 |
R-free | 0.23790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6KPU |
RMSD bond length | 0.006 |
RMSD bond angle | 0.948 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.820 |
High resolution limit [Å] | 3.700 | 3.700 |
Rmerge | 0.097 | 0.358 |
Number of reflections | 25988 | 60 |
<I/σ(I)> | 11.2 | |
Completeness [%] | 35.9 | |
Redundancy | 11.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 288 | 175mM MgCl2, 18% (w/v) PEG 2000 MME, 10% (w/v) glycerol, 5mM GSH, 0.1mM DTT, 1mg/ml butylhydroxytoluen, 100mM MES |