7WXQ
Crystal Structure of PL-5 family polysaccharide lyase PanPL-H172A mutant from Pandoraea apista in apo form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | BRUKER AXS MICROSTAR |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2019-10-25 |
Detector | BRUKER PHOTON 100 |
Wavelength(s) | 1.54178 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 35.918, 84.251, 91.780 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 62.070 - 2.030 |
R-factor | 0.1934 |
Rwork | 0.191 |
R-free | 0.23960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7wxj |
RMSD bond length | 0.004 |
RMSD bond angle | 0.593 |
Data reduction software | PROTEUM PLUS |
Data scaling software | PROTEUM PLUS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 62.070 | 2.130 |
High resolution limit [Å] | 2.030 | 2.030 |
Rmerge | 0.096 | 0.278 |
Number of reflections | 18270 | 2227 |
<I/σ(I)> | 18.57 | 4.38 |
Completeness [%] | 97.8 | 92.7 |
Redundancy | 13.25 | 5.06 |
CC(1/2) | 0.998 | 0.946 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 295.15 | 0.1 M Sodium acetate trihydrate pH 5.5, 25% w/v Polyethylene glycol 3,350 |