7WWW
Crystal Structure of Moonlighting GAPDH protein of Lactobacillus gasseri
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13C1 |
Synchrotron site | NSRRC |
Beamline | BL13C1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-11-01 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97622 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 114.922, 114.922, 118.620 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.673 - 1.880 |
Rwork | 0.134 |
R-free | 0.21700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3lvf |
RMSD bond length | 0.007 |
RMSD bond angle | 1.404 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.950 |
High resolution limit [Å] | 1.880 | 1.880 |
Rmerge | 0.067 | 0.546 |
Rmeas | 0.070 | 0.572 |
Rpim | 0.020 | 0.165 |
Number of reflections | 32168 | 3031 |
<I/σ(I)> | 41.7 | 3.7 |
Completeness [%] | 98.8 | 94.8 |
Redundancy | 12 | 10.5 |
CC(1/2) | 0.960 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | 0.1 M sodium cacodylate pH 6.5, 16% (w/v) PEG 4000 |