7WH9
holo structure of emodin 1-OH O-methyltransferase complex with emodin and S-Adenosyl-L-homocysteine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 162.093, 162.093, 130.219 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 27.292 - 2.803 |
R-factor | 0.1766 |
Rwork | 0.175 |
R-free | 0.21720 |
Structure solution method | SAD |
RMSD bond length | 0.011 |
RMSD bond angle | 1.327 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.900 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.109 | 0.501 |
Rmeas | 0.115 | 0.526 |
Rpim | 0.035 | 0.161 |
Number of reflections | 48697 | 4803 |
<I/σ(I)> | 24.5 | 4.5 |
Completeness [%] | 99.9 | 100 |
Redundancy | 10.3 | 10.7 |
CC(1/2) | 0.997 | 0.940 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 289.15 | 1.8M triamine citrate |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 289.15 | 1.8M triamine citrate |