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7WCE

Crystal structure of HIV-1 integrase catalytic core domain in complex with (2S)-2-(tert-Butoxy)-2-(10-fluoro-2-(2-hydroxy-4-methylphenyl)-1,4-dimethyl-5-(methylsulfonyl)-5,6-dihydrophenanthridin-3-yl)acetic acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2013-12-07
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5
Spacegroup nameP 31 2 1
Unit cell lengths72.401, 72.401, 65.776
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution22.692 - 1.850
R-factor0.1936
Rwork0.193
R-free0.21380
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3lpt
RMSD bond length0.004
RMSD bond angle0.962
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX (v1.11.1-2575)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.880
High resolution limit [Å]1.8505.0201.850
Rmerge0.0450.0330.428
Rmeas0.0500.0360.467
Rpim0.0200.0150.185
Total number of observations110157
Number of reflections17409946858
<I/σ(I)>23.1
Completeness [%]99.898.399.3
Redundancy6.35.86.1
CC(1/2)0.9980.890
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5293.150.1 M Sodium cacodylate pH 6.5, 0.23 M Ammonium sulfate, 6% PEG 8000, 5 mM DTT

220113

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