7W8D
The structure of Deinococcus radiodurans RuvC
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2021-11-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.200, 72.770, 112.300 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.706 - 2.750 |
R-factor | 0.275071348481 |
Rwork | 0.273 |
R-free | 0.30581 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ep4 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.757 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.710 | 2.790 |
High resolution limit [Å] | 2.750 | 2.750 |
Rmerge | 0.131 | 0.722 |
Number of reflections | 9594 | 674 |
<I/σ(I)> | 13.4 | |
Completeness [%] | 91.2 | |
Redundancy | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.8 | 289 | 0.2 M MgCl2, 0.1M HEPES (pH 7.8), 20% PEG 3350 |