7W27
Crystal structure of BEND3-BEN4-DNA complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-29 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9778 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 51.680, 61.592, 135.881 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.800 - 1.490 |
R-factor | 0.1547 |
Rwork | 0.153 |
R-free | 0.18400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ix7 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.550 |
High resolution limit [Å] | 1.490 | 3.230 | 1.500 |
Rmerge | 0.130 | 0.098 | 0.929 |
Rmeas | 0.137 | 0.104 | 1.012 |
Rpim | 0.043 | 0.033 | 0.388 |
Number of reflections | 35876 | 3797 | 3513 |
<I/σ(I)> | 5.3 | ||
Completeness [%] | 99.9 | 99.9 | 99.7 |
Redundancy | 9.6 | 10 | 6 |
CC(1/2) | 0.987 | 0.657 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 289 | 0.1 M BIS-TRIS, pH 6.5, 25% PEG3350 |