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7VVA

Pseudouridine bound structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 7A (6B, 6C1)
Synchrotron sitePAL/PLS
Beamline7A (6B, 6C1)
Temperature [K]100
Detector technologyCCD
Collection date2020-11-11
DetectorADSC QUANTUM 270
Wavelength(s)0.97932
Spacegroup nameP 1 21 1
Unit cell lengths71.954, 271.889, 101.202
Unit cell angles90.00, 110.91, 90.00
Refinement procedure
Resolution33.641 - 2.750
R-factor0.29677572334
Rwork0.296
R-free0.32486
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3kzh
RMSD bond length0.003
RMSD bond angle0.802
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.850
High resolution limit [Å]2.7502.750
Number of reflections921819234
<I/σ(I)>7.75
Completeness [%]99.7
Redundancy3.5
CC(1/2)0.9540.342
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION2950.1M lithium chloride, 0.1M MES (pH6.0), 18% PEG 6,000

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