Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7VTG

Pseudouridine bound structure of Pseudouridine kinase (PUKI) S30A mutant from Escherichia coli strain B

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 7A (6B, 6C1)
Synchrotron sitePAL/PLS
Beamline7A (6B, 6C1)
Temperature [K]100
Detector technologyCCD
Collection date2020-08-05
DetectorADSC QUANTUM 270
Wavelength(s)0.97932
Spacegroup nameP 3
Unit cell lengths185.092, 185.092, 51.747
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution33.722 - 1.899
R-factor0.219675766695
Rwork0.219
R-free0.26222
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3kzh
RMSD bond length0.018
RMSD bond angle1.662
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.970
High resolution limit [Å]1.8901.900
Number of reflections15596315713
<I/σ(I)>15.3
Completeness [%]99.6
Redundancy5.2
CC(1/2)0.9850.427
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2950.2M magnesium formate, 20%PEG 3350, 5% glycerol

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon