7VTF
cytidine bound structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
| Synchrotron site | PAL/PLS |
| Beamline | 7A (6B, 6C1) |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2020-11-11 |
| Detector | ADSC QUANTUM 270 |
| Wavelength(s) | 0.97932 |
| Spacegroup name | P 3 |
| Unit cell lengths | 185.999, 185.999, 50.960 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 36.954 - 2.202 |
| R-factor | 0.250260452486 |
| Rwork | 0.249 |
| R-free | 0.29794 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3kzh |
| RMSD bond length | 0.004 |
| RMSD bond angle | 1.013 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.280 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Number of reflections | 99598 | 9985 |
| <I/σ(I)> | 13 | |
| Completeness [%] | 99.8 | |
| Redundancy | 5.3 | |
| CC(1/2) | 0.988 | 0.486 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 295 | 0.2M magnesium formate, 20% PEG 3350, 5% glycerol |






