7VRU
Crystal structure of PacII_M1M2S-DNA-SAH complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2020-05-12 |
Detector | DECTRIS EIGER2 S 4M |
Wavelength(s) | 0.978 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 109.800, 122.655, 131.361 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.240 - 2.400 |
R-factor | 0.1922 |
Rwork | 0.190 |
R-free | 0.23490 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 0.993 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX (1.19.2_4158) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.240 | 2.488 |
High resolution limit [Å] | 2.400 | 2.402 |
Rmerge | 0.031 | 0.247 |
Rmeas | 0.044 | 0.349 |
Rpim | 0.031 | 0.247 |
Number of reflections | 69399 | 6698 |
<I/σ(I)> | 17.54 | 2.22 |
Completeness [%] | 99.3 | 97.19 |
Redundancy | 2 | 2 |
CC(1/2) | 0.998 | 0.856 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M Imidazole (pH 6.7-7.2), 37%-40% PEG 400 |