7VQB
Structure of MA1831 from Methanosarcina acetivorans in complex with farnesyl pyrophosphate and dimethylallyl diphosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | LIQUID ANODE |
Source details | BRUKER METALJET |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-29 |
Detector | Bruker PHOTON III |
Wavelength(s) | 1.34138 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 111.642, 80.778, 59.806 |
Unit cell angles | 90.00, 103.56, 90.00 |
Refinement procedure
Resolution | 33.040 - 2.110 |
R-factor | 0.1562 |
Rwork | 0.154 |
R-free | 0.20170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7caq |
RMSD bond length | 0.009 |
RMSD bond angle | 1.532 |
Data reduction software | SAINT |
Data scaling software | Aimless (0.6.3) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.040 | 24.700 | 2.010 |
High resolution limit [Å] | 1.960 | 9.000 | 1.960 |
Rmerge | 0.109 | 0.031 | 0.652 |
Rmeas | 0.121 | 0.035 | 0.790 |
Rpim | 0.051 | 0.015 | 0.433 |
Total number of observations | 2014 | 4053 | |
Number of reflections | 33955 | 371 | 1509 |
<I/σ(I)> | 9.7 | 31.5 | 1.5 |
Completeness [%] | 97.2 | 95.3 | 61.1 |
Redundancy | 5.3 | 5.4 | 2.7 |
CC(1/2) | 0.997 | 0.999 | 0.674 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 298 | 1.5M ammonium sulfate, 0.1M Tris (pH 8.0), 12% glycerol |