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7VP5

Structure of a transcription factor and DNA complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-1A
Synchrotron sitePhoton Factory
BeamlineBL-1A
Temperature [K]100
Detector technologyPIXEL
Collection date2019-11-17
DetectorDECTRIS EIGER X 4M
Wavelength(s)1.08
Spacegroup nameP 1 21 1
Unit cell lengths78.766, 76.896, 83.078
Unit cell angles90.00, 113.85, 90.00
Refinement procedure
Resolution29.100 - 2.992
Rwork0.209
R-free0.26700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7vp3
RMSD bond length0.009
RMSD bond angle1.004
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.1003.098
High resolution limit [Å]2.9922.992
Rmerge0.1650.766
Number of reflections183541508
<I/σ(I)>8.8
Completeness [%]97.8
Redundancy6.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291100mM Tris pH 8.0 and 20% w/v PEG 4000

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PDB entries from 2024-05-15

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