Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7VP3

Structure of a transcription factor and DNA complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyPIXEL
Collection date2019-12-11
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9792
Spacegroup nameP 21 21 21
Unit cell lengths71.219, 112.784, 156.842
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution18.170 - 3.003
Rwork0.198
R-free0.24640
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7vp2
RMSD bond length0.010
RMSD bond angle1.165
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]18.1703.110
High resolution limit [Å]3.0033.003
Rmerge0.2600.834
Rmeas0.265
Number of reflections257991836
<I/σ(I)>19.26
Completeness [%]93.3
Redundancy25.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291100 mM Sodium citrate/Citric acid pH 5.5, 20% w/v PEG 4000 and 10% v/v 2-Propanol

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon