7VO6
High resolution crystal structure of human PSMD10 (Gankyrin)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
| Synchrotron site | RRCAT INDUS-2 |
| Beamline | PX-BL21 |
| Temperature [K] | 80 |
| Detector technology | CCD |
| Collection date | 2020-11-22 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.9795 |
| Spacegroup name | P 32 2 1 |
| Unit cell lengths | 60.085, 60.085, 122.377 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 47.930 - 1.710 |
| R-factor | 0.198 |
| Rwork | 0.196 |
| R-free | 0.23140 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1uoh |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.613 |
| Data reduction software | xia2 |
| Data scaling software | xia2 |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 47.930 | 47.910 | 1.580 |
| High resolution limit [Å] | 1.550 | 4.210 | 1.550 |
| Rmeas | 0.108 | 0.042 | 2.693 |
| Rpim | 0.035 | 0.014 | 1.217 |
| Total number of observations | 18969 | 7113 | |
| Number of reflections | 37545 | 2088 | 1616 |
| <I/σ(I)> | 7.1 | 49.3 | 0.1 |
| Completeness [%] | 99.0 | 100 | 86.2 |
| Redundancy | 8.8 | 9.1 | 4.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 295 | 60% v/v Tacsimate pH 7.0 (Hampton Research) |






