7VJ9
class II photolyase MmCPDII semiquinone to fully reduced TR-SFX studies (semiquinone dark structure)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | FREE ELECTRON LASER |
Source details | SACLA BEAMLINE BL2 |
Synchrotron site | SACLA |
Beamline | BL2 |
Temperature [K] | 293 |
Detector technology | CCD |
Collection date | 2020-02-21 |
Detector | MPCCD |
Wavelength(s) | 1.24 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 70.520, 70.520, 246.180 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.680 - 2.100 |
R-factor | 0.1657 |
Rwork | 0.164 |
R-free | 0.19980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2xry |
RMSD bond length | 0.002 |
RMSD bond angle | 0.465 |
Data reduction software | CrystFEL (0.6.3) |
Data scaling software | CrystFEL (0.6.3) |
Phasing software | PHENIX (5.80253) |
Refinement software | PHENIX ((1.19_4092: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.040 | 1.670 |
High resolution limit [Å] | 1.650 | 1.650 |
Number of reflections | 76053 | 3768 |
<I/σ(I)> | 15.3 | 1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 5161 | |
CC(1/2) | 0.990 | 0.590 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 277 | 0.5-0.65 M Li2SO4 10-15% (W/V) PEG8000 |