Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7VJ1

class II photolyase MmCPDII oxidized to semiquinone TR-SFX studies (10 us time-point)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeFREE ELECTRON LASER
Source detailsSACLA BEAMLINE BL2
Synchrotron siteSACLA
BeamlineBL2
Temperature [K]293
Detector technologyCCD
Collection date2019-05-28
DetectorMPCCD
Wavelength(s)1.2398
Spacegroup nameP 43 21 2
Unit cell lengths70.750, 70.750, 246.830
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.560 - 2.250
R-factor0.233
Rwork0.232
R-free0.24660
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6LM4
RMSD bond length0.002
RMSD bond angle0.543
Data reduction softwareCrystFEL (0.6.3)
Data scaling softwareCrystFEL (0.6.3)
Phasing softwareREFMAC (5.8.0253)
Refinement softwarePHENIX ((1.19_4092: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.5602.220
High resolution limit [Å]2.0502.050
Number of reflections406111997
<I/σ(I)>6.490.68
Completeness [%]100.0100
Redundancy554.467.8
CC(1/2)0.9990.468
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE2780.5-0.65 M Li2SO4 10-15% (W/V) PEG8000

251174

PDB entries from 2026-03-25

PDB statisticsPDBj update infoContact PDBjnumon