7VIM
The C-terminal DNA binding domain of EsrB from Edwardsiella piscicida
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-06 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979260 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 39.111, 58.051, 81.043 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.193 - 2.200 |
R-factor | 0.2316 |
Rwork | 0.229 |
R-free | 0.28070 |
Structure solution method | AB INITIO PHASING |
RMSD bond length | 0.008 |
RMSD bond angle | 1.112 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.7.3_928) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.193 | 47.193 | 2.310 |
High resolution limit [Å] | 2.188 | 6.920 | 2.190 |
Rmerge | 0.043 | 0.643 | |
Rmeas | 0.084 | 0.047 | 0.702 |
Rpim | 0.034 | 0.020 | 0.278 |
Total number of observations | 62270 | 2053 | 8294 |
Number of reflections | 9987 | 379 | 1368 |
<I/σ(I)> | 11.4 | 28.6 | 3 |
Completeness [%] | 99.4 | 99.8 | 96.1 |
Redundancy | 6.2 | 5.4 | 6.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 291 | 12% ethanol, 5% glycerol, 100mM Tris PH 8,5 |