7VID
The crystal structure of L-leucine dehydrogenase from Pseudomonas aeruginosa
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 11C |
Synchrotron site | PAL/PLS |
Beamline | 11C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-05-25 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9794 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 142.620, 90.180, 61.220 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 76.220 - 2.500 |
R-factor | 0.1983 |
Rwork | 0.196 |
R-free | 0.24860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1leh |
RMSD bond length | 0.008 |
RMSD bond angle | 0.968 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MrBUMP |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 90.200 | 2.600 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmeas | 0.160 | 1.420 |
Number of reflections | 28028 | 4015 |
<I/σ(I)> | 13.4 | 2.5 |
Completeness [%] | 99.8 | |
Redundancy | 11.6 | |
CC(1/2) | 0.998 | 0.714 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 295 | 12 % (w/v) polyethylene glycol 3,350, 0.1M sodium acetate trihydrate |