7VF4
Crystal structure of Vps75 from Candida albicans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NFPSS BEAMLINE BL19U1 |
Synchrotron site | NFPSS |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-26 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 83.610, 137.170, 226.520 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.750 - 3.100 |
R-factor | 0.2468 |
Rwork | 0.244 |
R-free | 0.29220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3q66 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MoRDa |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.210 |
High resolution limit [Å] | 3.100 | 6.670 | 3.100 |
Rmerge | 0.112 | 0.056 | 1.365 |
Rmeas | 0.117 | 0.059 | 1.422 |
Rpim | 0.033 | 0.017 | 0.394 |
Total number of observations | 613898 | ||
Number of reflections | 47803 | 5059 | 4665 |
<I/σ(I)> | 5.6 | ||
Completeness [%] | 99.2 | 98.9 | 98.8 |
Redundancy | 12.8 | 11.6 | 12.7 |
CC(1/2) | 0.999 | 0.802 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | 0.05M cesium chloride, 0.1M MES monohydrate pH 6.5, 30% (v/v) Jeffamine M-600 |