7VEJ
Crystal structure of Phytolacca americana UGT3 with kaempferol and UDP-2fluoroglucose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-04 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 93.866, 103.067, 108.893 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.770 - 1.850 |
R-factor | 0.2069 |
Rwork | 0.205 |
R-free | 0.23840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6lzy |
RMSD bond length | 0.006 |
RMSD bond angle | 0.889 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.770 | 1.916 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.050 | 0.440 |
Rmeas | 0.050 | 0.480 |
Rpim | 0.020 | 0.180 |
Number of reflections | 89096 | 8762 |
<I/σ(I)> | 19.7 | |
Completeness [%] | 98.3 | 97.87 |
Redundancy | 6.7 | 7 |
CC(1/2) | 0.990 | 0.920 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.15-0.20 M potassium acetate 20% (w/v) PEG 3350 |