7VC6
The structure of beta-xylosidase from Phanerochaete chrysosporium(PcBxl3)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2020-12-22 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 79.667, 91.292, 107.082 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.438 - 2.540 |
R-factor | 0.1784 |
Rwork | 0.175 |
R-free | 0.23790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ae6 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.727 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.18.2-3874)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.440 | 2.631 |
High resolution limit [Å] | 2.540 | 2.540 |
Number of reflections | 26406 | 2587 |
<I/σ(I)> | 11.52 | |
Completeness [%] | 99.9 | |
Redundancy | 2 | |
CC(1/2) | 0.995 | 0.770 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293.15 | 0.2M Lithium sulfate, 0.1M Tris (pH8.5), 40% v/v PEG 400 |