7V8W
Crystal structure of PsEst3 S128A variant complexed with malonate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-10-07 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97942 |
Spacegroup name | P 41 3 2 |
Unit cell lengths | 144.243, 144.243, 144.243 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.610 - 1.800 |
R-factor | 0.1892 |
Rwork | 0.188 |
R-free | 0.20820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7v8v |
RMSD bond length | 0.009 |
RMSD bond angle | 1.000 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.830 |
High resolution limit [Å] | 1.800 | 4.880 | 1.800 |
Rmerge | 1.000 | 0.028 | 0.533 |
Total number of observations | 1611395 | ||
Number of reflections | 48026 | 4528 | 4517 |
<I/σ(I)> | 5.3 | ||
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 17.9 | 25 | 11.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 296 | 1.1M malonic acid, 0.15M ammonium citrate tribasic, 0.072M succinic acid, 0.18M DL-Malic acid, 0.24M Sodium acetate, 0.3M sodium formate, 0.096M ammonium tartrate dibasic, pH 7.0 |