7V5R
The dimeric structure of G80A/H81A/L137D myoglobin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL45XU |
Synchrotron site | SPring-8 |
Beamline | BL45XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-22 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 56.160, 62.860, 81.980 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.370 - 1.390 |
R-factor | 0.2079 |
Rwork | 0.207 |
R-free | 0.23369 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3vm9 |
RMSD bond length | 0.017 |
RMSD bond angle | 2.277 |
Data reduction software | XDS |
Data scaling software | pointless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.330 | 1.410 |
High resolution limit [Å] | 1.390 | 1.390 |
Rmerge | 0.018 | |
Number of reflections | 59149 | 2987 |
<I/σ(I)> | 24.8 | |
Completeness [%] | 100.0 | |
Redundancy | 1.9 | |
CC(1/2) | 0.999 | 0.856 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 0.1 M Sodium acetate, 0.1 M Tris-HCl, 10 % (w/v) PEG 6000, and 5 % (w/v) PEG 200 |