7V53
Crystal structure of full-length phospholipase D from Pseudomonas aeruginosa PAO1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-24 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97774 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.329, 111.467, 144.758 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 55.730 - 2.100 |
R-factor | 0.1792 |
Rwork | 0.177 |
R-free | 0.21520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6kz9 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 88.320 | 2.150 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.086 | 0.426 |
Rmeas | 0.093 | 0.465 |
Rpim | 0.037 | 0.183 |
Total number of observations | 375158 | |
Number of reflections | 57759 | 4567 |
<I/σ(I)> | 13.7 | |
Completeness [%] | 96.2 | 99.5 |
Redundancy | 6.5 | 6.3 |
CC(1/2) | 0.997 | 0.930 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 291.1 | 0.2M Potassium Chloride, 0.05M Mg Chloride, 0.05M Tris Hydrochloride, 10% Polyethylene Glycol 4000 |