7V1V
Difructose dianhydride I synthase/hydrolase (alphaFFase1) from Bifidobacterium dentium, ligand-free form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 98.552, 156.970, 100.909 |
Unit cell angles | 90.00, 109.93, 90.00 |
Refinement procedure
Resolution | 49.690 - 1.960 |
R-factor | 0.1546 |
Rwork | 0.153 |
R-free | 0.19140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4kq7 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.587 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MoRDa |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.690 | 1.990 |
High resolution limit [Å] | 1.960 | 1.960 |
Rmerge | 0.098 | 0.432 |
Rmeas | 0.116 | 0.518 |
Rpim | 0.061 | 0.283 |
Number of reflections | 206183 | 10181 |
<I/σ(I)> | 10.3 | 2.9 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 3.5 | 3.2 |
CC(1/2) | 0.994 | 0.800 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 20% PEG3350, 0.2M di-sodium tartrate |