7V1G
Crystal structure of Omsk hemorrhagic fever virus NS5 MTase (with a GMP-Arg28 adduct and in complex with SAM)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-31 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 35.125, 89.685, 45.452 |
Unit cell angles | 90.00, 90.47, 90.00 |
Refinement procedure
Resolution | 32.710 - 1.380 |
R-factor | 0.2019 |
Rwork | 0.200 |
R-free | 0.22750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4k6m |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.430 |
High resolution limit [Å] | 1.380 | 2.970 | 1.380 |
Rmerge | 0.091 | 0.074 | 0.482 |
Rmeas | 0.102 | 0.084 | 0.531 |
Rpim | 0.045 | 0.039 | 0.219 |
Total number of observations | 342078 | ||
Number of reflections | 57331 | 5793 | 5506 |
<I/σ(I)> | 8.4 | ||
Completeness [%] | 99.4 | 98.9 | 96.2 |
Redundancy | 6 | 4.9 | 5.4 |
CC(1/2) | 0.991 | 0.921 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 5.6 | 289 | isopropanol, trisodium citrate, PEG 4000, glycerol |