7UYX
Structure of bacteriophage PA1c gp2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-11 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 60.955, 86.563, 71.879 |
Unit cell angles | 90.00, 110.94, 90.00 |
Refinement procedure
Resolution | 67.130 - 2.630 |
R-factor | 0.2723 |
Rwork | 0.271 |
R-free | 0.30010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Alphafold 2 model |
RMSD bond length | 0.004 |
RMSD bond angle | 0.537 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 67.130 | 2.740 |
High resolution limit [Å] | 2.630 | 2.630 |
Rmerge | 0.184 | 1.101 |
Rmeas | 0.220 | 1.306 |
Rpim | 0.119 | 0.694 |
Number of reflections | 20612 | 2402 |
<I/σ(I)> | 4.8 | 0.9 |
Completeness [%] | 98.5 | 94 |
Redundancy | 3.3 | 3.4 |
CC(1/2) | 0.981 | 0.462 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M Tris pH 8.5, 1.5 M Lithium sulfate |