7UW3
Structure of SARS-CoV-2 Nucleocapsid Protein N-Terminal Domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-1 |
Synchrotron site | SSRL |
Beamline | BL12-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-30 |
Detector | DECTRIS EIGER2 S 16M |
Wavelength(s) | 0.9800 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.943, 93.066, 96.820 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.410 - 1.700 |
R-factor | 0.2834 |
Rwork | 0.283 |
R-free | 0.29930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6m3m |
RMSD bond length | 0.003 |
RMSD bond angle | 0.692 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.410 | 1.730 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.097 | |
Rmeas | 0.100 | |
Rpim | 0.039 | |
Number of reflections | 57729 | 3009 |
<I/σ(I)> | 12.8 | |
Completeness [%] | 99.9 | |
Redundancy | 13.5 | |
CC(1/2) | 0.990 | 0.210 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 290 | 30% PEG4000, 100 mM MES, pH 6.5 |