7UKN
Crystal Structure of DDB1 in Complex with the H-Box Motif of pUL145
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 93 |
Detector technology | PIXEL |
Collection date | 2021-06-17 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 63.535, 134.664, 182.950 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.210 - 2.900 |
R-factor | 0.1976 |
Rwork | 0.194 |
R-free | 0.26100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3i7l |
RMSD bond length | 0.009 |
RMSD bond angle | 1.219 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.210 | 2.920 |
High resolution limit [Å] | 2.870 | 2.870 |
Rmerge | 0.132 | 1.793 |
Rmeas | 0.180 | |
Rpim | 0.070 | 0.840 |
Number of reflections | 34718 | 2877 |
<I/σ(I)> | 12.7 | 1.37 |
Completeness [%] | 97.4 | 82.67 |
Redundancy | 6.3 | 6.6 |
CC(1/2) | 0.992 | 0.488 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 100 mM MES (pH 6.5-6.7), 16% PEG 4000, 50 mM NaCl, 5 mM DTT |