7UK6
Apo form of YjfC from Escherichia coli K-12
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-07 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 66.323, 70.760, 112.041 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.620 - 1.900 |
R-factor | 0.1707 |
Rwork | 0.169 |
R-free | 0.19720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2iob |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.18.2-3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.420 | 44.420 | 1.940 |
High resolution limit [Å] | 1.900 | 9.110 | 1.900 |
Rmerge | 0.088 | 0.030 | 1.590 |
Rmeas | 0.092 | 0.031 | 1.650 |
Rpim | 0.025 | 0.009 | 0.439 |
Total number of observations | 559446 | 5114 | 37125 |
Number of reflections | 42317 | 460 | 2665 |
<I/σ(I)> | 15.5 | 47.5 | 1.9 |
Completeness [%] | 100.0 | 99.3 | 100 |
Redundancy | 13.2 | 11.1 | 13.9 |
CC(1/2) | 0.999 | 1.000 | 0.734 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289.15 | 200 mM lithium sulfate monohydrate, 0.1 M Tris-HCl pH 8.5, 20% PEG 4000 |