7UJX
Structure of cAMP-dependent protein kinase using a MD-MX procedure, produced using 2.4 Angstrom data
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 285 |
Detector technology | PIXEL |
Collection date | 2018-12-14 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.11583 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.976, 79.744, 99.058 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.530 - 2.400 |
R-factor | 0.1331 |
Rwork | 0.128 |
R-free | 0.17650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3fjq |
RMSD bond length | 0.004 |
RMSD bond angle | 0.778 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.530 | 2.486 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.183 | 0.702 |
Rmeas | 0.191 | 0.729 |
Rpim | 0.053 | 0.197 |
Number of reflections | 18876 | 1866 |
<I/σ(I)> | 15.9 | |
Completeness [%] | 99.9 | 100 |
Redundancy | 13 | 13.7 |
CC(1/2) | 0.993 | 0.959 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 20% PEG 4000, 0.05 M MES pH 5.2, 0.05 M MgCl2, and 0.005 M DTT |