7UGW
M. tuberculosis DNA gyrase cleavage core bound to DNA and evybactin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-04 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9201 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 83.075, 105.088, 250.183 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.460 - 3.000 |
R-factor | 0.2044 |
Rwork | 0.201 |
R-free | 0.28600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5bs8 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.555 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.460 | 3.107 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.140 | |
Rmeas | 0.155 | |
Rpim | 0.066 | |
Number of reflections | 44612 | 4388 |
<I/σ(I)> | 10.44 | |
Completeness [%] | 99.6 | |
Redundancy | 4 | |
CC(1/2) | 0.995 | 0.822 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 7-12% PEG10K; 100mM MES pH 6.0; 200mM magnesium acetate |