7UF3
RibB from Vibrio cholera bound with L-xylulose-5-phosphate (L-Xy5P) and manganese
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL9-2 |
| Synchrotron site | SSRL |
| Beamline | BL9-2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-02-08 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97946 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 60.369, 79.016, 91.349 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 39.510 - 2.000 |
| R-factor | 0.1665 |
| Rwork | 0.161 |
| R-free | 0.21360 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4p8e |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.117 |
| Data reduction software | XDS |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | REFMAC (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 39.510 | 2.050 |
| High resolution limit [Å] | 2.000 | 2.000 |
| Rpim | 0.043 | 0.256 |
| Number of reflections | 15092 | 1060 |
| <I/σ(I)> | 16.9 | 3.8 |
| Completeness [%] | 99.6 | |
| Redundancy | 6.6 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.1 M lithium acetate, 12-18% w/v PEG3350 |
