7UCF
Structure of the BG505 SOSIP.664 trimer in complex with neutralizing antibody Fab fragments 10-1074 and BG24
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-01-27 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | .987 |
Spacegroup name | H 3 |
Unit cell lengths | 208.958, 208.958, 155.914 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.490 - 4.000 |
R-factor | 0.2472 |
Rwork | 0.245 |
R-free | 0.27720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5cez |
RMSD bond length | 0.017 |
RMSD bond angle | 1.984 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.490 | 4.060 |
High resolution limit [Å] | 3.800 | 3.800 |
Rmerge | 0.143 | 7.290 |
Rpim | 0.066 | 2.360 |
Number of reflections | 24941 | 4480 |
<I/σ(I)> | 7.4 | 0.3 |
Completeness [%] | 99.6 | |
Redundancy | 11.3 | |
CC(1/2) | 0.998 | 0.210 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 295 | 0.1 M Bis-Tris pH 6.5, 20% PEG1500 |