7U6H
HalD with ornithine and alpha-ketoglutarate
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 8.3.1 |
| Synchrotron site | ALS |
| Beamline | 8.3.1 |
| Temperature [K] | 194 |
| Detector technology | PIXEL |
| Collection date | 2019-11-03 |
| Detector | DECTRIS PILATUS3 S 6M |
| Wavelength(s) | 1.11 |
| Spacegroup name | P 1 |
| Unit cell lengths | 72.050, 73.226, 73.176 |
| Unit cell angles | 66.24, 75.80, 85.28 |
Refinement procedure
| Resolution | 69.837 - 2.000 |
| R-factor | 0.1787 |
| Rwork | 0.177 |
| R-free | 0.21260 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6nie |
| Data reduction software | XDS (Mar 15, 2019) |
| Data scaling software | Aimless (0.7.4) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 69.840 | 69.840 | 2.040 |
| High resolution limit [Å] | 2.000 | 10.770 | 2.000 |
| Rmerge | 0.134 | 0.037 | 2.276 |
| Rmeas | 0.144 | 0.040 | 2.472 |
| Rpim | 0.054 | 0.014 | 0.956 |
| Total number of observations | 620910 | 4481 | 28725 |
| Number of reflections | 87446 | 578 | 4414 |
| <I/σ(I)> | 8.8 | 31.1 | 1.1 |
| Completeness [%] | 97.5 | 99.7 | 96.1 |
| Redundancy | 7.1 | 7.8 | 6.5 |
| CC(1/2) | 0.998 | 0.999 | 0.507 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 291 | Equal volumes of protein solution (PkHalD (6 mg/ml), ornithine (3 mM), alpha-ketoglutarate (3 mM, pH7)) and reservoir solution (MES buffer (100 mM, pH 6.2), 25% (w/v) PEG 550 MME were mixed |






