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7U39

Structure of the apo form of Streptomyces venezuelae GlgX, the glycogen debranching enzyme

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyPIXEL
Collection date2020-03-23
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths181.496, 204.856, 195.719
Unit cell angles90.00, 90.43, 90.00
Refinement procedure
Resolution67.920 - 3.510
R-factor0.2164
Rwork0.211
R-free0.27560
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2vuy
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]67.9203.550
High resolution limit [Å]3.5103.510
Rpim0.0120.363
Number of reflections1317954072
<I/σ(I)>5.52.1
Completeness [%]83.5
Redundancy1.7
CC(1/2)0.9690.802
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2989% propanol, 675 mM ammonium citrate/ammonium hydroxide pH 8.5

219869

PDB entries from 2024-05-15

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