7U39
Structure of the apo form of Streptomyces venezuelae GlgX, the glycogen debranching enzyme
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-03-23 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 181.496, 204.856, 195.719 |
Unit cell angles | 90.00, 90.43, 90.00 |
Refinement procedure
Resolution | 67.920 - 3.510 |
R-factor | 0.2164 |
Rwork | 0.211 |
R-free | 0.27560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2vuy |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 67.920 | 3.550 |
High resolution limit [Å] | 3.510 | 3.510 |
Rpim | 0.012 | 0.363 |
Number of reflections | 131795 | 4072 |
<I/σ(I)> | 5.5 | 2.1 |
Completeness [%] | 83.5 | |
Redundancy | 1.7 | |
CC(1/2) | 0.969 | 0.802 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 9% propanol, 675 mM ammonium citrate/ammonium hydroxide pH 8.5 |