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7U38

Pixantrone tethered DNA duplex

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-22
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.91840
Spacegroup nameP 64 2 2
Unit cell lengths95.921, 95.921, 73.118
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution27.710 - 2.490
R-factor0.2462
Rwork0.245
R-free0.26180
Structure solution methodSAD
RMSD bond length0.010
RMSD bond angle1.381
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareAutoSol
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.580
High resolution limit [Å]2.4905.3602.490
Rmerge0.1310.0871.212
Rmeas0.1330.0881.229
Rpim0.0220.0140.198
Total number of observations276573
Number of reflections7367835710
<I/σ(I)>3.9
Completeness [%]99.9100100
Redundancy37.536.437.9
CC(1/2)0.9990.917
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5291Crystallized from drops containing 2.2 M ammonium sulfate, and 2.8% to 3.8% PEG-400, in 0.1 M HEPES sodium

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