7TXL
Crystal structure of EgtU solute binding domain from Streptococcus pneumoniae D39 in complex with L-ergothioneine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2021-10-21 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.07216 |
Spacegroup name | F 2 2 2 |
Unit cell lengths | 119.868, 128.743, 207.540 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.860 - 2.440 |
R-factor | 0.1981 |
Rwork | 0.196 |
R-free | 0.24770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4z7e |
RMSD bond length | 0.004 |
RMSD bond angle | 0.603 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.860 | 2.540 |
High resolution limit [Å] | 2.440 | 2.440 |
Rmeas | 0.195 | 1.282 |
Rpim | 0.073 | 0.496 |
Number of reflections | 29967 | 3349 |
<I/σ(I)> | 8.5 | 1.6 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 7.1 | 6.7 |
CC(1/2) | 0.994 | 0.714 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 1.6 M Sodium citrate tribasic dihydrate pH 6.5 |