7TX3
Neutron crystal structure of SARS-CoV-2 NSP3 macrodomain at 293 K (P43 crystal form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 293 |
Detector technology | PIXEL |
Collection date | 2021-03-29 |
Detector | DECTRIS EIGER R 4M |
Wavelength(s) | 1.54 |
Spacegroup name | P 43 |
Unit cell lengths | 89.328, 89.328, 40.349 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 14.120 - 1.890 |
Rwork | 0.226 |
R-free | 0.27500 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.474 |
Data reduction software | Mantid |
Data scaling software | LAUENORM |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.390 | 1.960 | 1.630 |
High resolution limit [Å] | 1.600 | 1.890 | 1.600 |
Rmerge | 0.087 | 0.252 | 0.265 |
Rpim | 0.038 | ||
Number of reflections | 42240 | 2125 | 1935 |
<I/σ(I)> | 15.6 | 2.7 | 4.6 |
Completeness [%] | 99.6 | 87.39 | 93.1 |
Redundancy | 5.9 | 3.1 | 2.8 |
CC(1/2) | 0.996 | 0.411 | 0.874 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9.5 | 293 | 100 mM CHES pH 9.5, 34% PEG 3000 |
1 | VAPOR DIFFUSION, SITTING DROP | 9.5 | 293 | 100 mM CHES pH 9.5, 34% PEG 3000 |