7TV2
X-ray crystal structure of HIV-2 CA protein CTD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-27 |
Detector | DECTRIS EIGER2 S 16M |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 48.813, 30.919, 46.494 |
Unit cell angles | 90.00, 90.56, 90.00 |
Refinement procedure
Resolution | 24.410 - 1.980 |
R-factor | 0.2056 |
Rwork | 0.203 |
R-free | 0.24610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6axx |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 26.120 | 26.120 | 2.030 |
High resolution limit [Å] | 1.980 | 9.070 | 1.980 |
Rmerge | 0.058 | 0.030 | 0.257 |
Rmeas | 0.072 | 0.037 | 0.318 |
Rpim | 0.041 | 0.022 | 0.184 |
Total number of observations | 12687 | 146 | 908 |
Number of reflections | 4761 | 54 | 348 |
<I/σ(I)> | 11.1 | 21.5 | 3.1 |
Completeness [%] | 96.3 | 90.1 | 96.4 |
Redundancy | 2.7 | 2.7 | 2.6 |
CC(1/2) | 0.997 | 0.999 | 0.962 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 1.2 M tri-sodium citrate, 0.1M Bis-Tris propane, pH 7.0 |