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7TPV

Selenium-free nitrogenase Fe protein (Av2) from A. vinelandii (5mM KSeCN Soaked)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2021-03-12
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97869, 0.98062
Spacegroup nameP 2 21 21
Unit cell lengths45.363, 73.691, 74.170
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.700 - 1.490
R-factor0.176
Rwork0.175
R-free0.19890
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6n4l
Data reduction softwareXDS
Data scaling softwareAimless (0.7.7)
Phasing softwareMOLREP
Refinement softwarePHENIX (1.19.2-4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.3501.520
High resolution limit [Å]1.4901.490
Rmerge0.0711.095
Rmeas0.0761.191
Rpim0.0290.462
Number of reflections411432448
<I/σ(I)>17.9
Completeness [%]99.499.5
Redundancy1312.4
CC(1/2)0.9990.877
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529836-41% PEG400, 0.1-0.3 M sodium chloride, 0.1 M HEPES, pH 7.5, 2.5 mM dithionite, 0.17 mM Cymal-7, 5 mM potassium selenocyanate

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PDB entries from 2024-11-13

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